BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018F08SP1|AL427355
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1715 1673 0.0
>3x_Contig1715
Length = 16241
Score = 1673 bits (836), Expect = 0.0
Identities = 880/902 (97%), Gaps = 1/902 (0%)
Strand = Plus / Plus
Query: 3 aaaagttctacttggaactgccggttgctcggatgtggtggtatgakaatcaktcctctg 62
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 4135 aaaagttctacttggaactgccggttgctcggatgtggtggtatgagaatcagtcctctg 4194
Query: 63 tggaggaggaggtaaatctgctaggggtaacattctcatggcaggtggtgcactttctga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4195 tggaggaggaggtaaatctgctaggggtaacattctcatggcaggtggtgcactttctga 4254
Query: 123 actattggaggctggttcttcctctgtatgctggggcaacgagccattttkttgtcccgg 182
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4255 actattggaggctggttcttcctctgtatgctggggcaacgagccattttgttgtcccgg 4314
Query: 183 cggcggcggcaacgttcttgatgaagctttagcaactccaccatactcttgggaaggtct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4315 cggcggcggcaacgttcttgatgaagctttagcaactccaccatactcttgggaaggtct 4374
Query: 243 gcgcgacgaaagttaagttttattttykttagctggcgaagttaccattkatctcggtgg 302
||||||||||||| |||||| | | ||||||||||||||||||||| ||||||||||
Sbjct: 4375 gcgcgacgaaagtgaagtttgaggatcgttagctggcgaagttaccattgatctcggtgg 4434
Query: 303 tttggggggaggagcraaaccaacgtcaacattatagttatwatcacctaacaccgcagc 362
||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 4435 tttggggggaggagcgaaaccaacgtcaacattatagttataagcacctaacaccgcagc 4494
Query: 363 ttgatgtacttcctctttgggtctacctatgggagcacgttctgtggaggtaatgcgctg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4495 ttgatgtacttcctctttgggtctacctatgggagcacgttctgtggaggtaatgcgctg 4554
Query: 423 gtgagtttgaatcggaggtaatktcggtttcgaagacacaggaggacgtggaggatttgg 482
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4555 gtgagtttgaatcggaggtaatgtcggtttcgaagacacaggaggacgtggaggatttgg 4614
Query: 483 tggcttatktkatactgtaggacgagcatgcgatacaggtggtgacattggcaatccgtt 542
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4615 tggcttatgtgatactgtaggacgagcatgcgatacaggtggtgacattggcaatccgtt 4674
Query: 543 atgcgttggctttggcggaggtgggaaatatacagtatattcatgataaactcccgtgat 602
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 4675 atgcgttggctttggcggaggtgggaaagatacagtagattcatgataaactcccgtgat 4734
Query: 603 actttcattgggtctaacttgtgtcatcaccaacttcagctgatgttccagttgctgcag 662
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4735 actttcattgggtctaacttg-gtcatcaccaacttcagctgatgttccagttgctgcag 4793
Query: 663 ctggggtcacagtgtttggtttggtatgatcaacagatgtaggtggtctgacattccttg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4794 ctggggtcacagtgtttggtttggtatgatcaacagatgtaggtggtctgacattccttg 4853
Query: 723 aaggcaaaggtgcaggacctggtgaaagtkatttccccttctccaatacggatgcgtccc 782
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4854 aaggcaaaggtgcaggacctggtgaaagtgatttccccttctccaatacggatgcgtccc 4913
Query: 783 ttgatgaactcttcaaacttgaagaagatgacctatccttgtggagaggaggtgtcactt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4914 ttgatgaactcttcaaacttgaagaagatgacctatccttgtggagaggaggtgtcactt 4973
Query: 843 gatgaatatcaattgcactcacaggttgcagctcaattttyttcttctccttccgttcat 902
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4974 gatgaatatcaattgcactcacaggttgcagctcaattttcttcttctccttccgttcat 5033
Query: 903 ca 904
||
Sbjct: 5034 ca 5035
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4676
Number of Sequences: 1807
Number of extensions: 4676
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)